ENSCAPP00000006541 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000006541

annotation not available (89 aa)

Predicted Functional Partners:

ENSCAPP00000010453

0.987

LMNA

0.982

ANKLE2

0.881

ENSCAPP00000001423

0.868

LMNB1

0.868

ENSCAPP00000013838

0.858

VRK2

0.852

VRK1

0.852

ENSCAPP00000011676

0.833

ENSCAPP00000016010

0.787

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKLE2	ENSCAPP00000001423	ENSCAPP00000008969	ENSCAPP00000001423	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.531
ANKLE2	ENSCAPP00000006541	ENSCAPP00000008969	ENSCAPP00000006541	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.881
ANKLE2	ENSCAPP00000010453	ENSCAPP00000008969	ENSCAPP00000010453	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.627
ANKLE2	ENSCAPP00000011676	ENSCAPP00000008969	ENSCAPP00000011676	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.579
ANKLE2	ENSCAPP00000013838	ENSCAPP00000008969	ENSCAPP00000013838	Ankyrin repeat and LEM domain containing 2.	annotation not available	0.494
ANKLE2	LMNA	ENSCAPP00000008969	ENSCAPP00000014374	Ankyrin repeat and LEM domain containing 2.	Lamin A/C.	0.585
ANKLE2	LMNB1	ENSCAPP00000008969	ENSCAPP00000008136	Ankyrin repeat and LEM domain containing 2.	Lamin B1.	0.531
ANKLE2	VRK1	ENSCAPP00000008969	ENSCAPP00000011853	Ankyrin repeat and LEM domain containing 2.	VRK serine/threonine kinase 1.	0.855
ANKLE2	VRK2	ENSCAPP00000008969	ENSCAPP00000005014	Ankyrin repeat and LEM domain containing 2.	VRK serine/threonine kinase 2.	0.855
ENSCAPP00000001423	ANKLE2	ENSCAPP00000001423	ENSCAPP00000008969	annotation not available	Ankyrin repeat and LEM domain containing 2.	0.531
ENSCAPP00000001423	ENSCAPP00000006541	ENSCAPP00000001423	ENSCAPP00000006541	annotation not available	annotation not available	0.868
ENSCAPP00000001423	ENSCAPP00000010453	ENSCAPP00000001423	ENSCAPP00000010453	annotation not available	annotation not available	0.846
ENSCAPP00000001423	ENSCAPP00000011676	ENSCAPP00000001423	ENSCAPP00000011676	annotation not available	annotation not available	0.739
ENSCAPP00000001423	ENSCAPP00000016010	ENSCAPP00000001423	ENSCAPP00000016010	annotation not available	annotation not available	0.702
ENSCAPP00000001423	LMNA	ENSCAPP00000001423	ENSCAPP00000014374	annotation not available	Lamin A/C.	0.913
ENSCAPP00000006541	ANKLE2	ENSCAPP00000006541	ENSCAPP00000008969	annotation not available	Ankyrin repeat and LEM domain containing 2.	0.881
ENSCAPP00000006541	ENSCAPP00000001423	ENSCAPP00000006541	ENSCAPP00000001423	annotation not available	annotation not available	0.868
ENSCAPP00000006541	ENSCAPP00000010453	ENSCAPP00000006541	ENSCAPP00000010453	annotation not available	annotation not available	0.987
ENSCAPP00000006541	ENSCAPP00000011676	ENSCAPP00000006541	ENSCAPP00000011676	annotation not available	annotation not available	0.833
ENSCAPP00000006541	ENSCAPP00000013838	ENSCAPP00000006541	ENSCAPP00000013838	annotation not available	annotation not available	0.858