RFX3 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RFX3

Regulatory factor X3. (649 aa)

Predicted Functional Partners:

ENSCAPP00000002259

0.854

ATR

0.838

FOXJ1

0.730

TONSL

0.694

RFXANK

0.673

ENSCAPP00000006425

0.631

ENSCAPP00000001980

0.573

HIVEP2

0.569

HIVEP1

0.566

RORA

0.564

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATR	ENSCAPP00000002259	ENSCAPP00000016254	ENSCAPP00000002259	ATR serine/threonine kinase.	annotation not available	0.993
ATR	RFX3	ENSCAPP00000016254	ENSCAPP00000006543	ATR serine/threonine kinase.	Regulatory factor X3.	0.838
ENSCAPP00000001980	ENSCAPP00000002259	ENSCAPP00000001980	ENSCAPP00000002259	annotation not available	annotation not available	0.843
ENSCAPP00000001980	RFX3	ENSCAPP00000001980	ENSCAPP00000006543	annotation not available	Regulatory factor X3.	0.573
ENSCAPP00000002259	ATR	ENSCAPP00000002259	ENSCAPP00000016254	annotation not available	ATR serine/threonine kinase.	0.993
ENSCAPP00000002259	ENSCAPP00000001980	ENSCAPP00000002259	ENSCAPP00000001980	annotation not available	annotation not available	0.843
ENSCAPP00000002259	RFX3	ENSCAPP00000002259	ENSCAPP00000006543	annotation not available	Regulatory factor X3.	0.854
ENSCAPP00000006425	RFX3	ENSCAPP00000006425	ENSCAPP00000006543	annotation not available	Regulatory factor X3.	0.631
ENSCAPP00000006425	TONSL	ENSCAPP00000006425	ENSCAPP00000006840	annotation not available	Tonsoku like, DNA repair protein.	0.485
FOXJ1	RFX3	ENSCAPP00000013776	ENSCAPP00000006543	Forkhead box J1.	Regulatory factor X3.	0.730
HIVEP1	RFX3	ENSCAPP00000011237	ENSCAPP00000006543	HIVEP zinc finger 1.	Regulatory factor X3.	0.566
HIVEP1	RORA	ENSCAPP00000011237	ENSCAPP00000002886	HIVEP zinc finger 1.	RAR related orphan receptor A.	0.572
HIVEP2	RFX3	ENSCAPP00000007465	ENSCAPP00000006543	HIVEP zinc finger 2.	Regulatory factor X3.	0.569
RFX3	ATR	ENSCAPP00000006543	ENSCAPP00000016254	Regulatory factor X3.	ATR serine/threonine kinase.	0.838
RFX3	ENSCAPP00000001980	ENSCAPP00000006543	ENSCAPP00000001980	Regulatory factor X3.	annotation not available	0.573
RFX3	ENSCAPP00000002259	ENSCAPP00000006543	ENSCAPP00000002259	Regulatory factor X3.	annotation not available	0.854
RFX3	ENSCAPP00000006425	ENSCAPP00000006543	ENSCAPP00000006425	Regulatory factor X3.	annotation not available	0.631
RFX3	FOXJ1	ENSCAPP00000006543	ENSCAPP00000013776	Regulatory factor X3.	Forkhead box J1.	0.730
RFX3	HIVEP1	ENSCAPP00000006543	ENSCAPP00000011237	Regulatory factor X3.	HIVEP zinc finger 1.	0.566
RFX3	HIVEP2	ENSCAPP00000006543	ENSCAPP00000007465	Regulatory factor X3.	HIVEP zinc finger 2.	0.569