STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HINT3Histidine triad nucleotide binding protein 3. (115 aa)    
Predicted Functional Partners:
TBP
TATA-box binding protein.
   
 0.652
ENSCAPP00000015721
annotation not available
   
 0.652
TBPL1
TATA-box binding protein like 1.
   
 0.652
TAF1A
TATA-box binding protein associated factor, RNA polymerase I subunit A.
    
 0.619
UBN2
Ubinuclein 2.
    
 0.619
ENSCAPP00000007958
annotation not available
    
 0.615
CDK20
Cyclin dependent kinase 20.
    
 0.615
ENSCAPP00000005732
annotation not available
  
 
  0.596
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.594
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.588
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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