Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006551annotation not available (251 aa)    
Predicted Functional Partners:
KERA
Keratocan.
     
 0.854
CHST1
Carbohydrate sulfotransferase 1.
   
  0.847
ENSCAPP00000005249
annotation not available
     
  0.846
LUM
Lumican.
     
 0.787
ENSCAPP00000011441
annotation not available
   
  
 0.693
B3GNT7
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7.
      
 0.667
CHST9
Carbohydrate sulfotransferase 9.
      
 0.571
OGN
Osteoglycin.
     
 0.571
WDR64
WD repeat domain 64.
      
 0.570
CHST8
Carbohydrate sulfotransferase 8.
      
 0.568
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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