Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP83Centrosomal protein 83. (609 aa)    
Predicted Functional Partners:
FBF1
Fas binding factor 1.
    
 0.986
CEP89
Centrosomal protein 89.
     
 0.986
CEP164
Centrosomal protein 164.
    
 0.984
NIN
Ninein.
    
 0.978
CENPF
Centromere protein F.
   
 0.951
ODF2
Outer dense fiber of sperm tails 2.
   
 0.945
DZIP1
DAZ interacting zinc finger protein 1.
     
  0.936
CEP19
Centrosomal protein 19.
      
 0.892
ENSCAPP00000012529
annotation not available
    
 0.885
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
 0.820
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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