STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAX6Paired box 6. (436 aa)    
Predicted Functional Partners:
TIMM22
Translocase of inner mitochondrial membrane 22.
    
 0.929
ENSCAPP00000003716
annotation not available
   
 0.901
TIMM10
Translocase of inner mitochondrial membrane 10.
   
 0.876
ENSCAPP00000006226
annotation not available
    
 0.853
CACTIN
Cactin, spliceosome C complex subunit.
    
 0.767
CISD2
CDGSH iron sulfur domain 2.
    
 0.767
NEUROD4
Neuronal differentiation 4.
   
 
 0.700
ENSCAPP00000007601
annotation not available
    
 0.676
CREBBP
CREB binding protein.
    
 0.666
ISL1
ISL LIM homeobox 1.
   
 
 0.657
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.