Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006580annotation not available (120 aa)    
Predicted Functional Partners:
CAMLG
Calcium modulating ligand.
    
 
 0.973
ENSCAPP00000014136
annotation not available
    
 0.958
TRAF2
TNF receptor associated factor 2.
    
   0.924
TNFRSF17
TNF receptor superfamily member 17.
   
  
 0.890
TNFRSF13C
TNF receptor superfamily member 13C.
   
  
 0.834
ENSCAPP00000013239
annotation not available
    
 
 0.831
TRAF6
TNF receptor associated factor 6.
    
 
 0.827
TRAF1
TNF receptor associated factor 1.
    
 
 0.807
TRAF3
TNF receptor associated factor 3.
    
 
 0.613
CR2
Complement C3d receptor 2.
      
 0.557
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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