STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAXDNAD(P)HX dehydratase. (336 aa)    
Predicted Functional Partners:
ENSCAPP00000000451
annotation not available
  
 
 0.946
GART
annotation not available
  
 
 0.733
PNPO
Pyridoxamine 5'-phosphate oxidase.
    
 0.730
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
  
  
 0.635
RRM1
Ribonucleotide reductase catalytic subunit M1.
     
 0.569
HAAO
3-hydroxyanthranilate 3,4-dioxygenase.
      
 0.546
PRDX5
Peroxiredoxin 5.
      
 0.532
MTHFD2
annotation not available
    
  0.517
PGM1
Phosphoglucomutase 1.
 
 
    0.474
PGM5
Phosphoglucomutase 5.
 
 
    0.470
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.