STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006586annotation not available (418 aa)    
Predicted Functional Partners:
ACTL6A
Actin like 6A.
   
 0.999
SIN3B
SIN3 transcription regulator family member B.
    
 0.998
SIN3A
SIN3 transcription regulator family member A.
    
 0.998
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 0.996
ENSCAPP00000002861
annotation not available
    
 0.996
ENSCAPP00000006485
annotation not available
    
 0.996
ENSCAPP00000001714
annotation not available
   
 0.995
ENSCAPP00000004252
annotation not available
   
 0.995
ENSCAPP00000006354
annotation not available
   
 0.995
WDR73
WD repeat domain 73.
   
 0.995
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.