ENSCAPP00000006586 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCAPP00000006586

annotation not available (418 aa)

Predicted Functional Partners:

ACTL6A

0.986

ENSCAPP00000013350

0.983

SIN3B

0.979

SIN3A

0.979

SMARCB1

0.977

BRMS1

0.974

ENSCAPP00000018476

0.974

ENSCAPP00000002861

0.966

ENSCAPP00000006485

0.966

ENSCAPP00000003729

0.960

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	ENSCAPP00000002861	ENSCAPP00000013540	ENSCAPP00000002861	Actin like 6A.	annotation not available	0.484
ACTL6A	ENSCAPP00000006485	ENSCAPP00000013540	ENSCAPP00000006485	Actin like 6A.	annotation not available	0.484
ACTL6A	ENSCAPP00000006586	ENSCAPP00000013540	ENSCAPP00000006586	Actin like 6A.	annotation not available	0.986
ACTL6A	ENSCAPP00000013350	ENSCAPP00000013540	ENSCAPP00000013350	Actin like 6A.	annotation not available	0.986
ACTL6A	SMARCB1	ENSCAPP00000013540	ENSCAPP00000002532	Actin like 6A.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.999
BRMS1	ENSCAPP00000002861	ENSCAPP00000018374	ENSCAPP00000002861	BRMS1 transcriptional repressor and anoikis regulator.	annotation not available	0.896
BRMS1	ENSCAPP00000003729	ENSCAPP00000018374	ENSCAPP00000003729	BRMS1 transcriptional repressor and anoikis regulator.	annotation not available	0.998
BRMS1	ENSCAPP00000006485	ENSCAPP00000018374	ENSCAPP00000006485	BRMS1 transcriptional repressor and anoikis regulator.	annotation not available	0.896
BRMS1	ENSCAPP00000006586	ENSCAPP00000018374	ENSCAPP00000006586	BRMS1 transcriptional repressor and anoikis regulator.	annotation not available	0.974
BRMS1	ENSCAPP00000013350	ENSCAPP00000018374	ENSCAPP00000013350	BRMS1 transcriptional repressor and anoikis regulator.	annotation not available	0.959
BRMS1	ENSCAPP00000018476	ENSCAPP00000018374	ENSCAPP00000018476	BRMS1 transcriptional repressor and anoikis regulator.	annotation not available	0.969
BRMS1	SIN3A	ENSCAPP00000018374	ENSCAPP00000010185	BRMS1 transcriptional repressor and anoikis regulator.	SIN3 transcription regulator family member A.	0.996
BRMS1	SIN3B	ENSCAPP00000018374	ENSCAPP00000000416	BRMS1 transcriptional repressor and anoikis regulator.	SIN3 transcription regulator family member B.	0.987
ENSCAPP00000002861	ACTL6A	ENSCAPP00000002861	ENSCAPP00000013540	annotation not available	Actin like 6A.	0.484
ENSCAPP00000002861	BRMS1	ENSCAPP00000002861	ENSCAPP00000018374	annotation not available	BRMS1 transcriptional repressor and anoikis regulator.	0.896
ENSCAPP00000002861	ENSCAPP00000003729	ENSCAPP00000002861	ENSCAPP00000003729	annotation not available	annotation not available	0.794
ENSCAPP00000002861	ENSCAPP00000006485	ENSCAPP00000002861	ENSCAPP00000006485	annotation not available	annotation not available	0.900
ENSCAPP00000002861	ENSCAPP00000006586	ENSCAPP00000002861	ENSCAPP00000006586	annotation not available	annotation not available	0.966
ENSCAPP00000002861	ENSCAPP00000013350	ENSCAPP00000002861	ENSCAPP00000013350	annotation not available	annotation not available	0.965
ENSCAPP00000002861	ENSCAPP00000018476	ENSCAPP00000002861	ENSCAPP00000018476	annotation not available	annotation not available	0.939