STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006591annotation not available (215 aa)    
Predicted Functional Partners:
TSSK4
Testis specific serine kinase 4.
    
 
 0.592
SSMEM1
Serine rich single-pass membrane protein 1.
      
 0.566
SPATA46
Spermatogenesis associated 46.
      
 0.563
TMEM190
Transmembrane protein 190.
      
 0.558
CCDC62
Coiled-coil domain containing 62.
      
 0.556
ENSCAPP00000017271
annotation not available
      
 0.553
HIPK4
Homeodomain interacting protein kinase 4.
      
 0.551
ENSCAPP00000016975
annotation not available
      
 0.546
SPATA16
Spermatogenesis associated 16.
      
 0.543
KSR2
Kinase suppressor of ras 2.
      
 0.534
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.