Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
YTHDC1YTH domain containing 1. (596 aa)    
Predicted Functional Partners:
YTHDC2
YTH domain containing 2.
    
 0.973
ENSCAPP00000014571
annotation not available
    
 0.960
ENSCAPP00000002198
annotation not available
    
 0.956
CLK2
CDC like kinase 2.
   
 
 0.955
CPSF1
Cleavage and polyadenylation specific factor 1.
    
 0.949
ZC3H3
Zinc finger CCCH-type containing 3.
     
 0.933
ENSCAPP00000003819
annotation not available
   
 
  0.930
TRA2A
Transformer 2 alpha homolog.
   
 0.930
ENSCAPP00000004668
annotation not available
   
 
 0.925
ENSCAPP00000007721
annotation not available
   
 0.915
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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