CMIP protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CMIP

c-Maf inducing protein. (678 aa)

Predicted Functional Partners:

ATP2C2

0.757

HIVEP2

0.685

SORCS2

0.667

MC1R

0.622

ENSCAPP00000004740

0.617

ERC2

0.617

ENSCAPP00000012015

0.615

SLC24A4

0.579

PTPRD

0.572

CENPN

0.571

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP2C2	CMIP	ENSCAPP00000003094	ENSCAPP00000006596	ATPase secretory pathway Ca2+ transporting 2.	c-Maf inducing protein.	0.757
ATP2C2	ENSCAPP00000004740	ENSCAPP00000003094	ENSCAPP00000004740	ATPase secretory pathway Ca2+ transporting 2.	annotation not available	0.569
CENPN	CMIP	ENSCAPP00000013735	ENSCAPP00000006596	Centromere protein N.	c-Maf inducing protein.	0.571
CENPN	MC1R	ENSCAPP00000013735	ENSCAPP00000017236	Centromere protein N.	Melanocortin 1 receptor.	0.813
CMIP	ATP2C2	ENSCAPP00000006596	ENSCAPP00000003094	c-Maf inducing protein.	ATPase secretory pathway Ca2+ transporting 2.	0.757
CMIP	CENPN	ENSCAPP00000006596	ENSCAPP00000013735	c-Maf inducing protein.	Centromere protein N.	0.571
CMIP	ENSCAPP00000004740	ENSCAPP00000006596	ENSCAPP00000004740	c-Maf inducing protein.	annotation not available	0.617
CMIP	ENSCAPP00000012015	ENSCAPP00000006596	ENSCAPP00000012015	c-Maf inducing protein.	annotation not available	0.615
CMIP	ERC2	ENSCAPP00000006596	ENSCAPP00000016234	c-Maf inducing protein.	ELKS/RAB6-interacting/CAST family member 2.	0.617
CMIP	HIVEP2	ENSCAPP00000006596	ENSCAPP00000007465	c-Maf inducing protein.	HIVEP zinc finger 2.	0.685
CMIP	MC1R	ENSCAPP00000006596	ENSCAPP00000017236	c-Maf inducing protein.	Melanocortin 1 receptor.	0.622
CMIP	PTPRD	ENSCAPP00000006596	ENSCAPP00000015055	c-Maf inducing protein.	Protein tyrosine phosphatase receptor type D.	0.572
CMIP	SLC24A4	ENSCAPP00000006596	ENSCAPP00000009064	c-Maf inducing protein.	Solute carrier family 24 member 4.	0.579
CMIP	SORCS2	ENSCAPP00000006596	ENSCAPP00000001592	c-Maf inducing protein.	Sortilin related VPS10 domain containing receptor 2.	0.667
ENSCAPP00000004740	ATP2C2	ENSCAPP00000004740	ENSCAPP00000003094	annotation not available	ATPase secretory pathway Ca2+ transporting 2.	0.569
ENSCAPP00000004740	CMIP	ENSCAPP00000004740	ENSCAPP00000006596	annotation not available	c-Maf inducing protein.	0.617
ENSCAPP00000012015	CMIP	ENSCAPP00000012015	ENSCAPP00000006596	annotation not available	c-Maf inducing protein.	0.615
ENSCAPP00000012015	MC1R	ENSCAPP00000012015	ENSCAPP00000017236	annotation not available	Melanocortin 1 receptor.	0.622
ERC2	CMIP	ENSCAPP00000016234	ENSCAPP00000006596	ELKS/RAB6-interacting/CAST family member 2.	c-Maf inducing protein.	0.617
ERC2	HIVEP2	ENSCAPP00000016234	ENSCAPP00000007465	ELKS/RAB6-interacting/CAST family member 2.	HIVEP zinc finger 2.	0.631