Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMOD3Tropomodulin 3. (407 aa)    
Predicted Functional Partners:
TWF2
Twinfilin actin binding protein 2.
   
 0.962
SSH1
Slingshot protein phosphatase 1.
    
 0.961
PHACTR2
Phosphatase and actin regulator 2.
    
   0.950
GSN
Gelsolin.
    
 
 0.912
ENSCAPP00000004891
annotation not available
    
 
 0.903
TMOD2
Tropomodulin 2.
     
  0.863
TMOD1
Tropomodulin 1.
     
  0.861
TMOD4
Tropomodulin 4.
     
  0.856
SCIN
Scinderin.
    
 
 0.853
ANLN
Anillin actin binding protein.
    
 
 0.848
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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