Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBOX5U-box domain containing 5. (527 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.942
ENSCAPP00000007672
annotation not available
    
 0.924
ENSCAPP00000016820
annotation not available
      
 0.896
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.859
VCP
Valosin containing protein.
  
 
 0.858
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.856
MLH1
mutL homolog 1.
  
   0.848
ENSCAPP00000011901
annotation not available
    
 0.804
UBE2Z
Ubiquitin conjugating enzyme E2 Z.
   
 0.785
MAVS
Mitochondrial antiviral signaling protein.
      
 0.750
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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