STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBXO30F-box protein 30. (740 aa)    
Predicted Functional Partners:
CUL1
Cullin 1.
    
 0.979
SKP1
S-phase kinase associated protein 1.
    
 0.960
MYO6
Myosin VI.
    
 
 0.850
ENSCAPP00000000576
annotation not available
   
  0.782
ENSCAPP00000004781
annotation not available
   
  0.782
RIMS2
Regulating synaptic membrane exocytosis 2.
     
  0.703
CUL3
Cullin 3.
    
 0.695
SHPRH
SNF2 histone linker PHD RING helicase.
    
 0.631
FRAS1
Fraser extracellular matrix complex subunit 1.
    
 0.622
FREM1
FRAS1 related extracellular matrix 1.
    
 0.619
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.