Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RFXANKRegulatory factor X associated ankyrin containing protein. (232 aa)    
Predicted Functional Partners:
ENSCAPP00000003646
annotation not available
    
 0.999
CIITA
Class II major histocompatibility complex transactivator.
   
 0.995
RFX7
Regulatory factor X7.
    
 
 0.975
ENSCAPP00000002314
annotation not available
   
  0.917
RFX1
Regulatory factor X1.
    
 0.890
RFX6
Regulatory factor X6.
    
 0.788
NLRC5
NLR family CARD domain containing 5.
    
 0.759
RFX4
Regulatory factor X4.
    
 0.758
RFX2
Regulatory factor X2.
    
 0.758
RFX3
Regulatory factor X3.
    
 0.706
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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