ENSCAPP00000006625 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSCAPP00000006625

annotation not available (344 aa)

Predicted Functional Partners:

CTNND1

0.987

ARVCF

0.953

NCAPG

0.945

ENSCAPP00000013033

0.942

ENSCAPP00000005516

0.905

TP53

0.843

PKP4

0.836

ENSCAPP00000001389

0.788

ENSCAPP00000013457

0.785

ENSCAPP00000011708

0.774

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARVCF	ENSCAPP00000006625	ENSCAPP00000011446	ENSCAPP00000006625	ARVCF delta catenin family member.	annotation not available	0.953
CTNND1	ENSCAPP00000006625	ENSCAPP00000008768	ENSCAPP00000006625	Catenin delta 1.	annotation not available	0.987
ENSCAPP00000001389	ENSCAPP00000006625	ENSCAPP00000001389	ENSCAPP00000006625	annotation not available	annotation not available	0.788
ENSCAPP00000005516	ENSCAPP00000006625	ENSCAPP00000005516	ENSCAPP00000006625	annotation not available	annotation not available	0.905
ENSCAPP00000006625	ARVCF	ENSCAPP00000006625	ENSCAPP00000011446	annotation not available	ARVCF delta catenin family member.	0.953
ENSCAPP00000006625	CTNND1	ENSCAPP00000006625	ENSCAPP00000008768	annotation not available	Catenin delta 1.	0.987
ENSCAPP00000006625	ENSCAPP00000001389	ENSCAPP00000006625	ENSCAPP00000001389	annotation not available	annotation not available	0.788
ENSCAPP00000006625	ENSCAPP00000005516	ENSCAPP00000006625	ENSCAPP00000005516	annotation not available	annotation not available	0.905
ENSCAPP00000006625	ENSCAPP00000011708	ENSCAPP00000006625	ENSCAPP00000011708	annotation not available	annotation not available	0.774
ENSCAPP00000006625	ENSCAPP00000013033	ENSCAPP00000006625	ENSCAPP00000013033	annotation not available	annotation not available	0.942
ENSCAPP00000006625	ENSCAPP00000013457	ENSCAPP00000006625	ENSCAPP00000013457	annotation not available	annotation not available	0.785
ENSCAPP00000006625	NCAPG	ENSCAPP00000006625	ENSCAPP00000011297	annotation not available	non-SMC condensin I complex subunit G.	0.945
ENSCAPP00000006625	PKP4	ENSCAPP00000006625	ENSCAPP00000016299	annotation not available	Plakophilin 4.	0.836
ENSCAPP00000006625	TP53	ENSCAPP00000006625	ENSCAPP00000017521	annotation not available	Tumor protein p53.	0.843
ENSCAPP00000011708	ENSCAPP00000006625	ENSCAPP00000011708	ENSCAPP00000006625	annotation not available	annotation not available	0.774
ENSCAPP00000011708	ENSCAPP00000013457	ENSCAPP00000011708	ENSCAPP00000013457	annotation not available	annotation not available	0.460
ENSCAPP00000011708	TP53	ENSCAPP00000011708	ENSCAPP00000017521	annotation not available	Tumor protein p53.	0.767
ENSCAPP00000013033	ENSCAPP00000006625	ENSCAPP00000013033	ENSCAPP00000006625	annotation not available	annotation not available	0.942
ENSCAPP00000013033	NCAPG	ENSCAPP00000013033	ENSCAPP00000011297	annotation not available	non-SMC condensin I complex subunit G.	0.889
ENSCAPP00000013457	ENSCAPP00000006625	ENSCAPP00000013457	ENSCAPP00000006625	annotation not available	annotation not available	0.785