Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FBLL1Fibrillarin like 1. (200 aa)    
Predicted Functional Partners:
DKC1
Dyskerin pseudouridine synthase 1.
   
 0.999
NOP58
NOP58 ribonucleoprotein.
   
 0.999
ENSCAPP00000014662
annotation not available
   
 0.997
SNU13
Small nuclear ribonucleoprotein 13.
   
 0.996
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.995
ENSCAPP00000006643
annotation not available
   
 0.994
ENSCAPP00000007368
annotation not available
   
 0.992
ENSCAPP00000012618
annotation not available
   
 0.992
MPHOSPH10
M-phase phosphoprotein 10.
   
 0.988
NOL6
Nucleolar protein 6.
   
 0.980
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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