ENSCAPP00000006631 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000006631

annotation not available (177 aa)

Predicted Functional Partners:

PRPF19

0.947

PLOD3

0.922

PLOD2

0.922

PLOD1

0.922

KMT2E

0.920

CAMKMT

0.912

SETD2

0.901

DOT1L

0.897

CDYL

0.884

CDYL2

0.884

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAMKMT	DOT1L	ENSCAPP00000016764	ENSCAPP00000002357	Calmodulin-lysine N-methyltransferase.	DOT1 like histone lysine methyltransferase.	0.938
CAMKMT	ENSCAPP00000006631	ENSCAPP00000016764	ENSCAPP00000006631	Calmodulin-lysine N-methyltransferase.	annotation not available	0.912
CAMKMT	KMT2E	ENSCAPP00000016764	ENSCAPP00000018689	Calmodulin-lysine N-methyltransferase.	Lysine methyltransferase 2E.	0.914
CAMKMT	PLOD1	ENSCAPP00000016764	ENSCAPP00000017669	Calmodulin-lysine N-methyltransferase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.	0.911
CAMKMT	PLOD2	ENSCAPP00000016764	ENSCAPP00000009189	Calmodulin-lysine N-methyltransferase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.	0.911
CAMKMT	PLOD3	ENSCAPP00000016764	ENSCAPP00000002176	Calmodulin-lysine N-methyltransferase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.	0.911
CAMKMT	SETD2	ENSCAPP00000016764	ENSCAPP00000006086	Calmodulin-lysine N-methyltransferase.	SET domain containing 2, histone lysine methyltransferase.	0.919
CDYL	CDYL2	ENSCAPP00000001333	ENSCAPP00000012235	Chromodomain Y like.	Chromodomain Y like 2.	0.675
CDYL	ENSCAPP00000006631	ENSCAPP00000001333	ENSCAPP00000006631	Chromodomain Y like.	annotation not available	0.884
CDYL	SETD2	ENSCAPP00000001333	ENSCAPP00000006086	Chromodomain Y like.	SET domain containing 2, histone lysine methyltransferase.	0.617
CDYL2	CDYL	ENSCAPP00000012235	ENSCAPP00000001333	Chromodomain Y like 2.	Chromodomain Y like.	0.675
CDYL2	ENSCAPP00000006631	ENSCAPP00000012235	ENSCAPP00000006631	Chromodomain Y like 2.	annotation not available	0.884
CDYL2	SETD2	ENSCAPP00000012235	ENSCAPP00000006086	Chromodomain Y like 2.	SET domain containing 2, histone lysine methyltransferase.	0.617
DOT1L	CAMKMT	ENSCAPP00000002357	ENSCAPP00000016764	DOT1 like histone lysine methyltransferase.	Calmodulin-lysine N-methyltransferase.	0.938
DOT1L	ENSCAPP00000006631	ENSCAPP00000002357	ENSCAPP00000006631	DOT1 like histone lysine methyltransferase.	annotation not available	0.897
DOT1L	KMT2E	ENSCAPP00000002357	ENSCAPP00000018689	DOT1 like histone lysine methyltransferase.	Lysine methyltransferase 2E.	0.874
DOT1L	PLOD1	ENSCAPP00000002357	ENSCAPP00000017669	DOT1 like histone lysine methyltransferase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.	0.911
DOT1L	PLOD2	ENSCAPP00000002357	ENSCAPP00000009189	DOT1 like histone lysine methyltransferase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.	0.911
DOT1L	PLOD3	ENSCAPP00000002357	ENSCAPP00000002176	DOT1 like histone lysine methyltransferase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.	0.911
DOT1L	SETD2	ENSCAPP00000002357	ENSCAPP00000006086	DOT1 like histone lysine methyltransferase.	SET domain containing 2, histone lysine methyltransferase.	0.977