Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTNAP1Contactin associated protein 1. (1261 aa)    
Predicted Functional Partners:
CNTN1
Contactin 1.
   
 0.989
NFASC
Neurofascin.
   
 0.984
CNTN2
Contactin 2.
   
 0.939
SYNGAP1
Synaptic Ras GTPase activating protein 1.
   
 
 0.843
CNTN4
Contactin 4.
   
 0.780
CNTN3
Contactin 3.
   
 0.748
CNTN6
Contactin 6.
   
 0.743
CNTN5
Contactin 5.
   
 0.743
ENSCAPP00000001356
annotation not available
   
 0.708
ENSCAPP00000013173
annotation not available
   
 0.708
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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