STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM65Tripartite motif containing 65. (370 aa)    
Predicted Functional Partners:
IFIH1
Interferon induced with helicase C domain 1.
   
 0.951
DDX58
DExD/H-box helicase 58.
   
 0.849
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
 0.727
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.697
ENSCAPP00000010366
annotation not available
    
  0.697
ENSCAPP00000000492
annotation not available
    
  0.693
ENSCAPP00000004155
annotation not available
    
  0.693
ENSCAPP00000014462
annotation not available
    
  0.693
ENSCAPP00000000214
annotation not available
    
 0.670
ENSCAPP00000009782
annotation not available
    
 0.670
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.