Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
C1orf174Chromosome 1 open reading frame 174. (207 aa)    
Predicted Functional Partners:
PDIK1L
PDLIM1 interacting kinase 1 like.
    
   0.958
IKZF1
IKAROS family zinc finger 1.
    
   0.854
JAGN1
Jagunal homolog 1.
      
 0.819
SAP18
Sin3A associated protein 18.
      
 0.732
MRPS16
Mitochondrial ribosomal protein S16.
   
  
 0.721
CNOT7
CCR4-NOT transcription complex subunit 7.
      
 0.692
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
      
 0.688
S100A16
S100 calcium binding protein A16.
      
 0.684
MRPL22
Mitochondrial ribosomal protein L22.
   
    0.658
RPS5
Ribosomal protein S5.
      
 0.585
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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