STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP2Nipsnap homolog 2. (248 aa)    
Predicted Functional Partners:
NIPSNAP1
Nipsnap homolog 1.
   
 
 0.980
SQSTM1
Sequestosome 1.
    
 
 0.958
ADCY6
Adenylate cyclase 6.
    
   0.952
OSBPL10
Oxysterol binding protein like 10.
   
  0.944
ENSCAPP00000005006
annotation not available
    
 
 0.915
ENSCAPP00000000528
annotation not available
   
   0.900
ENSCAPP00000000069
annotation not available
   
    0.859
KEAP1
Kelch like ECH associated protein 1.
    
   0.842
CRAT
Carnitine O-acetyltransferase.
    
   0.838
HADHA
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha.
   
   0.823
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.