STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006655annotation not available (512 aa)    
Predicted Functional Partners:
ENSCAPP00000001033
annotation not available
   
 
 0.984
APOB
Apolipoprotein B.
   
 
 0.967
APOC2
Apolipoprotein C2.
   
 
 0.965
ENSCAPP00000015384
annotation not available
   
 
 0.964
ENSCAPP00000017899
annotation not available
   
 
 0.962
CLU
Clusterin.
     
 0.957
APOA5
Apolipoprotein A5.
  
  
0.952
APOA1
Apolipoprotein A1.
  
 
0.946
APOM
Apolipoprotein M.
     
 0.945
LPL
Lipoprotein lipase.
     
 0.941
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.