Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006655annotation not available (512 aa)    
Predicted Functional Partners:
ENSCAPP00000001033
annotation not available
   
 
 0.999
ENSCAPP00000015384
annotation not available
   
 
 0.998
APOC2
Apolipoprotein C2.
   
 
 0.997
APOB
Apolipoprotein B.
   
 
 0.997
ENSCAPP00000017899
annotation not available
   
 
 0.995
APOM
Apolipoprotein M.
     
 0.994
APOA1
Apolipoprotein A1.
   
 
 0.992
APOA5
Apolipoprotein A5.
     
 0.991
LDLR
Low density lipoprotein receptor.
    
 0.972
LPL
Lipoprotein lipase.
     
 0.969
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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