STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
L1CAML1 cell adhesion molecule. (1236 aa)    
Predicted Functional Partners:
CNTN2
Contactin 2.
    
0.975
NRP1
Neuropilin 1.
    
 0.971
NCAM1
Neural cell adhesion molecule 1.
   
0.887
NCAM2
Neural cell adhesion molecule 2.
   
0.838
ANK1
Ankyrin 1.
    
 0.834
ANK2
Ankyrin 2.
    
 0.827
ENSCAPP00000004060
annotation not available
    
 0.819
CNTN1
Contactin 1.
   
0.814
EGFR
Epidermal growth factor receptor.
    
 0.799
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 
 0.782
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.