Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
L1CAML1 cell adhesion molecule. (1236 aa)    
Predicted Functional Partners:
NRP1
Neuropilin 1.
    
 0.989
CNTN2
Contactin 2.
   
 0.951
EGFR
Epidermal growth factor receptor.
    
 0.949
ENSCAPP00000003934
annotation not available
    
 0.941
ITGA5
Integrin subunit alpha 5.
    
 0.939
NCAM1
Neural cell adhesion molecule 1.
   
 0.936
NCAM2
Neural cell adhesion molecule 2.
   
 0.925
CNTN1
Contactin 1.
   
 0.902
EZR
Ezrin.
    
 0.897
FGFR1
Fibroblast growth factor receptor 1.
    
 0.869
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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