STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006657annotation not available (378 aa)    
Predicted Functional Partners:
NUP98
Nucleoporin 98.
   
 0.995
NUP93
Nucleoporin 93.
   
 0.993
ENSCAPP00000015092
annotation not available
   
 0.993
MCM3AP
Minichromosome maintenance complex component 3 associated protein.
   
 0.992
NUP107
Nucleoporin 107.
    
 0.992
SEH1L
SEH1 like nucleoporin.
    
 0.992
RAE1
Ribonucleic acid export 1.
    
 0.992
RANBP2
RAN binding protein 2.
   
 0.991
NUP214
Nucleoporin 214.
   
 0.990
ZC3HC1
Zinc finger C3HC-type containing 1.
    
 0.988
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.