Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAMDC2MAM domain containing 2. (560 aa)    
Predicted Functional Partners:
NCAPD3
non-SMC condensin II complex subunit D3.
      
 0.752
FAM163A
Family with sequence similarity 163 member A.
      
 0.674
SASH1
SAM and SH3 domain containing 1.
    
 
 0.584
RAB21
RAB21, member RAS oncogene family.
      
 0.570
GPNMB
Glycoprotein nmb.
      
 0.562
FRAS1
Fraser extracellular matrix complex subunit 1.
      
 0.519
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.511
NTNG1
Netrin G1.
    
 0.493
WDR90
WD repeat domain 90.
    
   0.482
LRRK2
Leucine rich repeat kinase 2.
    
  0.476
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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