STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UROSUroporphyrinogen III synthase. (183 aa)    
Predicted Functional Partners:
HMBS
Hydroxymethylbilane synthase.
  
 0.997
ALAD
Aminolevulinate dehydratase.
  
 0.990
UROD
Uroporphyrinogen decarboxylase.
  
 
 0.966
ENSCAPP00000009962
annotation not available
  
 
 0.917
ENSCAPP00000000390
annotation not available
  
 
 0.880
FECH
Ferrochelatase.
  
  
 0.691
FLAD1
Flavin adenine dinucleotide synthetase 1.
     
 0.635
RFK
Riboflavin kinase.
     
 0.622
PCNA
Proliferating cell nuclear antigen.
     
 0.621
MMAB
Metabolism of cobalamin associated B.
     
 0.602
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.