Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006686annotation not available (222 aa)    
Predicted Functional Partners:
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.961
SRF
Serum response factor.
    
 0.941
NFATC1
Nuclear factor of activated T cells 1.
    
 0.870
SQSTM1
Sequestosome 1.
    
  0.867
NFATC4
Nuclear factor of activated T cells 4.
     
 0.866
NFATC2
Nuclear factor of activated T cells 2.
    
 0.866
ENSCAPP00000007468
annotation not available
     
  0.849
TBX20
T-box transcription factor 20.
   
 0.798
TBX5
T-box transcription factor 5.
   
 0.797
ENSCAPP00000006439
annotation not available
   
  0.787
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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