Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
TMEM86ATransmembrane protein 86A. (239 aa)    
Predicted Functional Partners:
GDPD1
Glycerophosphodiester phosphodiesterase domain containing 1.
     
 0.916
GDPD3
Glycerophosphodiester phosphodiesterase domain containing 3.
     
 0.916
TMEM86B
Transmembrane protein 86B.
     
 0.912
PLA2G2E
Phospholipase A2 group IIE.
     
  0.911
PLA2G12B
Phospholipase A2 group XIIB.
     
  0.911
PLA2G1B
Phospholipase A2 group IB.
     
  0.911
PLA2G2D
Phospholipase A2 group IID.
     
  0.911
PLA2G4F
Phospholipase A2 group IVF.
     
  0.911
PLA2G5
Phospholipase A2 group V.
     
  0.911
LPCAT4
Lysophosphatidylcholine acyltransferase 4.
     
  0.911
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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