STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM86ATransmembrane protein 86A. (239 aa)    
Predicted Functional Partners:
PLB1
Phospholipase B1.
   
 
  0.685
C11orf54
Chromosome 11 open reading frame 54.
      
 0.548
GET3
Guided entry of tail-anchored proteins factor 3, ATPase.
      
 0.548
CX3CL1
C-X3-C motif chemokine ligand 1.
      
 0.536
ADAMTS3
ADAM metallopeptidase with thrombospondin type 1 motif 3.
      
 0.531
MAP2K5
Mitogen-activated protein kinase kinase 5.
      
 0.420
ITSN2
Intersectin 2.
     
 0.406
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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