STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP54Signal recognition particle 54. (429 aa)    
Predicted Functional Partners:
ENSCAPP00000004029
annotation not available
    
 0.999
ENSCAPP00000013443
annotation not available
   
 0.999
SRP68
Signal recognition particle 68.
    
 0.999
SRP72
Signal recognition particle 72.
   
 0.999
SRPRA
SRP receptor subunit alpha.
  
 0.998
ENSCAPP00000000576
annotation not available
    
  0.988
ENSCAPP00000004781
annotation not available
    
  0.988
RPL35
Ribosomal protein L35.
  
 
 0.986
RPL23
Ribosomal protein L23.
  
 
 0.982
RPS9
Ribosomal protein S9.
  
 
 0.981
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.