STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000006694annotation not available (796 aa)    
Predicted Functional Partners:
ENSCAPP00000015173
annotation not available
  
   
 0.794
ENSCAPP00000009320
annotation not available
     
 0.769
PLCH2
Phospholipase C eta 2.
      
 0.692
CPB2
Carboxypeptidase B2.
      
 0.670
PHACTR1
Phosphatase and actin regulator 1.
      
 0.664
LRRC58
Leucine rich repeat containing 58.
     
 0.612
GFOD2
Glucose-fructose oxidoreductase domain containing 2.
    
 
 0.603
CFAP74
Cilia and flagella associated protein 74.
   
  
 0.576
ENSCAPP00000010410
annotation not available
      
 0.570
PANK4
Pantothenate kinase 4 (inactive).
    
 
 0.512
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: medium (78%) [HD]