Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYL1Myosin light chain 1. (179 aa)    
Predicted Functional Partners:
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.999
MYL3
Myosin light chain 3.
   
 
  0.997
MYH13
Myosin heavy chain 13.
   
 0.997
TNNC2
Troponin C2, fast skeletal type.
   
  0.993
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.993
MYH15
Myosin heavy chain 15.
   
 0.990
MYH3
Myosin heavy chain 3.
   
 0.990
MYL2
Myosin light chain 2.
   
 0.989
MYH7B
Myosin heavy chain 7B.
   
 0.989
MYH8
Myosin heavy chain 8.
   
 0.989
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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