STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTBD9BTB domain containing 9. (574 aa)    
Predicted Functional Partners:
FAF1
Fas associated factor 1.
    
   0.935
MRPL3
Mitochondrial ribosomal protein L3.
   
 
 0.879
ENSCAPP00000011294
annotation not available
   
 
 0.873
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.872
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.871
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.865
MRPL22
Mitochondrial ribosomal protein L22.
   
 
 0.860
MRPL15
Mitochondrial ribosomal protein L15.
   
   0.857
MRPL33
Mitochondrial ribosomal protein L33.
   
 
 0.856
ENSCAPP00000016527
annotation not available
   
 
 0.844
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.