STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000007267annotation not available (274 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.722
RANBP2
RAN binding protein 2.
    
 0.721
KDM6B
Lysine demethylase 6B.
    
 0.704
ENSCAPP00000015921
annotation not available
    
 0.665
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.657
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.643
TEP1
Telomerase associated protein 1.
    
 0.640
NUP107
Nucleoporin 107.
    
 0.615
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.604
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.