STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000007736annotation not available (270 aa)    
Predicted Functional Partners:
TP73
Tumor protein p73.
  
 
0.983
ENSCAPP00000007186
annotation not available
    
 0.932
TP53
Tumor protein p53.
  
 
0.926
ATM
ATM serine/threonine kinase.
   
 0.896
ENSCAPP00000002259
annotation not available
    
 0.873
ITCH
Itchy E3 ubiquitin protein ligase.
    
 0.870
GABPB1
GA binding protein transcription factor subunit beta 1.
    
  0.856
ATR
ATR serine/threonine kinase.
    
 0.855
WRN
WRN RecQ like helicase.
    
 0.852
ENSCAPP00000017732
annotation not available
    
 0.850
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.