STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM208Transmembrane protein 208. (103 aa)    
Predicted Functional Partners:
ENSCAPP00000000641
annotation not available
   
 0.988
XRCC3
X-ray repair cross complementing 3.
    
 0.931
ENSCAPP00000002906
annotation not available
    
   0.892
ATG9B
Autophagy related 9B.
    
   0.892
DMC1
DNA meiotic recombinase 1.
    
 0.721
RAD51C
RAD51 paralog C.
    
 0.721
RAD51
RAD51 recombinase.
    
 0.717
RAD51D
RAD51 paralog D.
    
 0.717
GET3
Guided entry of tail-anchored proteins factor 3, ATPase.
    
 
 0.675
GET1
Guided entry of tail-anchored proteins factor 1.
    
 
 0.656
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.