STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGDPhosphogluconate dehydrogenase. (275 aa)    
Predicted Functional Partners:
G6PD
Glucose-6-phosphate dehydrogenase.
 0.996
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
 0.996
TALDO1
Transaldolase 1.
  
 0.980
ENSCAPP00000006160
annotation not available
   
 0.973
PGLS
6-phosphogluconolactonase.
 
 
 0.973
ENSCAPP00000011129
annotation not available
   
 
 0.920
TKTL2
Transketolase like 2.
  
 
 0.902
TKTL1
Transketolase like 1.
  
 
 0.902
TKT
Transketolase.
  
 
 0.902
XYLB
Xylulokinase.
    
 0.865
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.