STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGPL1Sphingosine-1-phosphate lyase 1. (470 aa)    
Predicted Functional Partners:
SGPP2
Sphingosine-1-phosphate phosphatase 2.
    
 0.968
ENSCAPP00000002615
annotation not available
   
 0.965
SPHK1
Sphingosine kinase 1.
   
 0.964
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.946
PLPP2
Phospholipid phosphatase 2.
    
 0.946
ABAT
4-aminobutyrate aminotransferase.
  
 0.940
MED18
Mediator complex subunit 18.
    
 0.937
MED6
Mediator complex subunit 6.
    
 0.933
MED21
Mediator complex subunit 21.
    
  0.927
MED23
Mediator complex subunit 23.
     
 0.926
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.