STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IWS1Interacts with SUPT6H, CTD assembly factor 1. (680 aa)    
Predicted Functional Partners:
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor.
   
 0.999
CTDP1
CTD phosphatase subunit 1.
   
 0.982
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 0.977
SSRP1
Structure specific recognition protein 1.
   
 0.972
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.968
ENSCAPP00000001157
annotation not available
   
 0.967
POLR2C
RNA polymerase II subunit C.
    
 0.960
ENSCAPP00000013573
annotation not available
   
 0.958
EEPD1
Endonuclease/exonuclease/phosphatase family domain containing 1.
   
 0.958
POLR2B
RNA polymerase II subunit B.
   
 0.954
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.