STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HEATR1HEAT repeat containing 1. (1724 aa)    
Predicted Functional Partners:
WDR75
WD repeat domain 75.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.999
RRP7A
Ribosomal RNA processing 7 homolog A.
   
 0.999
ENSCAPP00000001291
annotation not available
   
 0.999
MPHOSPH10
M-phase phosphoprotein 10.
   
 0.999
WDR36
WD repeat domain 36.
   
 0.999
PDCD11
Programmed cell death 11.
   
 0.999
KRR1
KRR1 small subunit processome component homolog.
   
 0.999
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.999
NOP14
NOP14 nucleolar protein.
   
 0.999
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.