ENSCAPP00000010453 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000010453

annotation not available (170 aa)

Predicted Functional Partners:

ENSCAPP00000006541

0.987

LMNA

0.984

BANF2

0.958

ENSCAPP00000001423

0.846

LMNB1

0.846

ENSCAPP00000013838

0.790

ENSCAPP00000011676

0.744

GFAP

0.742

LBR

0.740

ENSCAPP00000003219

0.722

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BANF2	ENSCAPP00000001423	ENSCAPP00000018293	ENSCAPP00000001423	Barrier to autointegration factor 2.	annotation not available	0.782
BANF2	ENSCAPP00000010453	ENSCAPP00000018293	ENSCAPP00000010453	Barrier to autointegration factor 2.	annotation not available	0.958
BANF2	ENSCAPP00000011676	ENSCAPP00000018293	ENSCAPP00000011676	Barrier to autointegration factor 2.	annotation not available	0.815
BANF2	ENSCAPP00000013838	ENSCAPP00000018293	ENSCAPP00000013838	Barrier to autointegration factor 2.	annotation not available	0.762
BANF2	GFAP	ENSCAPP00000018293	ENSCAPP00000015295	Barrier to autointegration factor 2.	Glial fibrillary acidic protein.	0.731
BANF2	LMNA	ENSCAPP00000018293	ENSCAPP00000014374	Barrier to autointegration factor 2.	Lamin A/C.	0.867
BANF2	LMNB1	ENSCAPP00000018293	ENSCAPP00000008136	Barrier to autointegration factor 2.	Lamin B1.	0.782
ENSCAPP00000001423	BANF2	ENSCAPP00000001423	ENSCAPP00000018293	annotation not available	Barrier to autointegration factor 2.	0.782
ENSCAPP00000001423	ENSCAPP00000003219	ENSCAPP00000001423	ENSCAPP00000003219	annotation not available	annotation not available	0.649
ENSCAPP00000001423	ENSCAPP00000006541	ENSCAPP00000001423	ENSCAPP00000006541	annotation not available	annotation not available	0.868
ENSCAPP00000001423	ENSCAPP00000010453	ENSCAPP00000001423	ENSCAPP00000010453	annotation not available	annotation not available	0.846
ENSCAPP00000001423	ENSCAPP00000011676	ENSCAPP00000001423	ENSCAPP00000011676	annotation not available	annotation not available	0.739
ENSCAPP00000001423	LBR	ENSCAPP00000001423	ENSCAPP00000008779	annotation not available	Lamin B receptor.	0.551
ENSCAPP00000001423	LMNA	ENSCAPP00000001423	ENSCAPP00000014374	annotation not available	Lamin A/C.	0.913
ENSCAPP00000003219	ENSCAPP00000001423	ENSCAPP00000003219	ENSCAPP00000001423	annotation not available	annotation not available	0.649
ENSCAPP00000003219	ENSCAPP00000010453	ENSCAPP00000003219	ENSCAPP00000010453	annotation not available	annotation not available	0.722
ENSCAPP00000003219	ENSCAPP00000013838	ENSCAPP00000003219	ENSCAPP00000013838	annotation not available	annotation not available	0.461
ENSCAPP00000003219	LMNA	ENSCAPP00000003219	ENSCAPP00000014374	annotation not available	Lamin A/C.	0.869
ENSCAPP00000003219	LMNB1	ENSCAPP00000003219	ENSCAPP00000008136	annotation not available	Lamin B1.	0.649
ENSCAPP00000006541	ENSCAPP00000001423	ENSCAPP00000006541	ENSCAPP00000001423	annotation not available	annotation not available	0.868