ENSCAPP00000010890 protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000010890

annotation not available (163 aa)

Predicted Functional Partners:

ENSCAPP00000007382

0.759

EPHX2

0.747

BARD1

0.736

ENSCAPP00000016271

0.720

NBN

0.684

PLA2G4A

0.673

ENSCAPP00000008628

0.672

FDX1

0.661

SYF2

0.655

WRN

0.650

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BARD1	ENSCAPP00000010890	ENSCAPP00000016499	ENSCAPP00000010890	BRCA1 associated RING domain 1.	annotation not available	0.736
BARD1	ENSCAPP00000016271	ENSCAPP00000016499	ENSCAPP00000016271	BRCA1 associated RING domain 1.	annotation not available	0.991
BARD1	NBN	ENSCAPP00000016499	ENSCAPP00000014883	BRCA1 associated RING domain 1.	Nibrin.	0.999
BARD1	PLA2G4A	ENSCAPP00000016499	ENSCAPP00000018609	BRCA1 associated RING domain 1.	Phospholipase A2 group IVA.	0.477
BARD1	WRN	ENSCAPP00000016499	ENSCAPP00000017049	BRCA1 associated RING domain 1.	WRN RecQ like helicase.	0.997
ENSCAPP00000007382	ENSCAPP00000008628	ENSCAPP00000007382	ENSCAPP00000008628	annotation not available	annotation not available	0.473
ENSCAPP00000007382	ENSCAPP00000010890	ENSCAPP00000007382	ENSCAPP00000010890	annotation not available	annotation not available	0.759
ENSCAPP00000007382	ENSCAPP00000016271	ENSCAPP00000007382	ENSCAPP00000016271	annotation not available	annotation not available	0.998
ENSCAPP00000007382	EPHX2	ENSCAPP00000007382	ENSCAPP00000005800	annotation not available	Epoxide hydrolase 2.	0.811
ENSCAPP00000007382	FDX1	ENSCAPP00000007382	ENSCAPP00000006164	annotation not available	Ferredoxin 1.	0.559
ENSCAPP00000008628	ENSCAPP00000007382	ENSCAPP00000008628	ENSCAPP00000007382	annotation not available	annotation not available	0.473
ENSCAPP00000008628	ENSCAPP00000010890	ENSCAPP00000008628	ENSCAPP00000010890	annotation not available	annotation not available	0.672
ENSCAPP00000008628	ENSCAPP00000016271	ENSCAPP00000008628	ENSCAPP00000016271	annotation not available	annotation not available	0.575
ENSCAPP00000008628	EPHX2	ENSCAPP00000008628	ENSCAPP00000005800	annotation not available	Epoxide hydrolase 2.	0.773
ENSCAPP00000008628	FDX1	ENSCAPP00000008628	ENSCAPP00000006164	annotation not available	Ferredoxin 1.	0.867
ENSCAPP00000008628	WRN	ENSCAPP00000008628	ENSCAPP00000017049	annotation not available	WRN RecQ like helicase.	0.481
ENSCAPP00000010890	BARD1	ENSCAPP00000010890	ENSCAPP00000016499	annotation not available	BRCA1 associated RING domain 1.	0.736
ENSCAPP00000010890	ENSCAPP00000007382	ENSCAPP00000010890	ENSCAPP00000007382	annotation not available	annotation not available	0.759
ENSCAPP00000010890	ENSCAPP00000008628	ENSCAPP00000010890	ENSCAPP00000008628	annotation not available	annotation not available	0.672
ENSCAPP00000010890	ENSCAPP00000016271	ENSCAPP00000010890	ENSCAPP00000016271	annotation not available	annotation not available	0.720