STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000011428annotation not available (374 aa)    
Predicted Functional Partners:
CASQ2
Calsequestrin 2.
   
 0.918
RYR2
Ryanodine receptor 2.
   
 
 0.918
RYR1
Ryanodine receptor 1.
   
 
 0.884
RYR3
Ryanodine receptor 3.
   
 
 0.848
F10
Coagulation factor X.
    
   0.843
ENSCAPP00000003958
annotation not available
   
 0.832
ENSCAPP00000009412
annotation not available
   
 0.832
ENSCAPP00000007065
annotation not available
     
 0.678
ENSCAPP00000011677
annotation not available
    
 0.566
SYNC
Syncoilin, intermediate filament protein.
    
 0.566
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.