STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGFOD32-oxoglutarate and iron dependent oxygenase domain containing 3. (271 aa)    
Predicted Functional Partners:
PPIC
Peptidylprolyl isomerase C.
   
 0.581
TICRR
TOPBP1 interacting checkpoint and replication regulator.
   
 0.581
RAPGEFL1
Rap guanine nucleotide exchange factor like 1.
      
 0.552
ENSCAPP00000005766
annotation not available
      
 0.528
PPIL4
Peptidylprolyl isomerase like 4.
   
 0.416
PARPBP
PARP1 binding protein.
   
 0.416
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.