STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGI3Leucine rich repeat LGI family member 3. (520 aa)    
Predicted Functional Partners:
ENSCAPP00000005227
annotation not available
 
 
  
 0.746
ADAM22
ADAM metallopeptidase domain 22.
   
 
 0.700
ADAM23
ADAM metallopeptidase domain 23.
   
 
 0.692
TEP1
Telomerase associated protein 1.
    
 0.668
ENSCAPP00000018013
annotation not available
    
 
 0.641
ADAM11
ADAM metallopeptidase domain 11.
   
 
 0.625
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.584
C1QC
Complement C1q C chain.
    
  0.581
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
      
 0.562
TAF12
TATA-box binding protein associated factor 12.
    
  0.547
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.