STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF2IGeneral transcription factor IIi. (837 aa)    
Predicted Functional Partners:
ENSCAPP00000007529
annotation not available
    
 0.928
ENSCAPP00000010050
annotation not available
    
 
 0.865
PRKG1
Protein kinase cGMP-dependent 1.
    
  0.840
GTF2IRD1
GTF2I repeat domain containing 1.
     
0.800
USF1
Upstream transcription factor 1.
    
 
 0.740
ENSCAPP00000003241
annotation not available
    
 
 0.650
HDAC3
Histone deacetylase 3.
    
 
 0.635
HDAC1
Histone deacetylase 1.
    
 
 0.624
HDAC2
Histone deacetylase 2.
    
 
 0.594
UNC79
Unc-79 homolog, NALCN channel complex subunit.
      
 0.580
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.