STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM118AFamily with sequence similarity 118 member A. (392 aa)    
Predicted Functional Partners:
ENSCAPP00000007661
annotation not available
    
 0.694
RHBDD3
Rhomboid domain containing 3.
    
 0.668
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
    
 
 0.628
FILIP1L
Filamin A interacting protein 1 like.
    
 0.613
ECI2
enoyl-CoA delta isomerase 2.
    
  0.610
ENSCAPP00000017181
annotation not available
   
 0.605
REEP6
Receptor accessory protein 6.
    
 
 0.597
LETM2
Leucine zipper and EF-hand containing transmembrane protein 2.
    
 
 0.596
GAK
Cyclin G associated kinase.
   
 0.588
ENSCAPP00000013876
annotation not available
    
  0.586
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.