STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZZEF1Zinc finger ZZ-type and EF-hand domain containing 1. (2564 aa)    
Predicted Functional Partners:
ADGRB1
Adhesion G protein-coupled receptor B1.
    
 0.701
ENSCAPP00000016784
annotation not available
    
 0.701
ADGRB2
Adhesion G protein-coupled receptor B2.
    
 0.701
RANBP2
RAN binding protein 2.
   
 0.651
ENSCAPP00000001550
annotation not available
    
  0.640
NEK6
NIMA related kinase 6.
    
 0.598
ENSCAPP00000017531
annotation not available
    
 0.598
RNF8
Ring finger protein 8.
   
  0.584
CCDC58
Coiled-coil domain containing 58.
      
 0.566
KATNBL1
Katanin regulatory subunit B1 like 1.
      
 0.566
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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