STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APEX1Apurinic/apyrimidinic endodeoxyribonuclease 1. (284 aa)    
Predicted Functional Partners:
FEN1
Flap structure-specific endonuclease 1.
  
 0.995
TEP1
Telomerase associated protein 1.
   
 0.973
NTHL1
Nth like DNA glycosylase 1.
  
 0.941
ENSCAPP00000005260
annotation not available
  
  
 0.932
PCNA
Proliferating cell nuclear antigen.
  
 0.921
POLB
DNA polymerase beta.
    
 0.910
ENSCAPP00000012091
annotation not available
   
 0.901
OGG1
8-oxoguanine DNA glycosylase.
  
 0.895
ENSCAPP00000017572
annotation not available
   
 0.890
ENSCAPP00000003173
annotation not available
  
 0.876
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.